Datasets:

---

imageomics

/

TreeOfLife-10M

like 46

Follow

HDR Imageomics Institute 161

@thompsonmj and @vimar , I just need to add the updated catalog, then this should be ready assuming the text looks good.

Looks good to me.

Last part will be to update the text embeddings with the updated model.

All pieces are here, but we must wait for the corresponding BioCLIP update to be ready. They must be merged together so model weights are consistent with the presentation here.

I updated the text embeddings (naming scheme only) one last time due to TOL-200M needs for pybioclip consistency. This only impacts the JSON file, which is now duplicated in this repo. I added further clarification in the dataset card for this change.

embeddings/
    txt_emb_biocap.json
    txt_emb_biocap.npy
    txt_emb_bioclip.json
    txt_emb_bioclip.npy
    # generic 'species' emb files are for pybioclip backward-compatibility
    txt_emb_species.json
    txt_emb_species.npy